CDS

Accession Number TCMCG007C51580
gbkey CDS
Protein Id XP_009111312.1
Location join(1180931..1181109,1181426..1181708,1181976..1182065,1182148..1182228,1182330..1182407,1182490..1182555,1182680..1182760,1182852..1182959)
Gene LOC103836768
GeneID 103836768
Organism Brassica rapa

Protein

Length 321aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009113064.3
Definition syntaxin-42 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category U
Description Belongs to the syntaxin family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K08489        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04130        [VIEW IN KEGG]
map04130        [VIEW IN KEGG]
GOs GO:0000139        [VIEW IN EMBL-EBI]
GO:0000149        [VIEW IN EMBL-EBI]
GO:0002790        [VIEW IN EMBL-EBI]
GO:0002831        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006906        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007030        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009306        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0022406        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031201        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032101        [VIEW IN EMBL-EBI]
GO:0032588        [VIEW IN EMBL-EBI]
GO:0032940        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046903        [VIEW IN EMBL-EBI]
GO:0048278        [VIEW IN EMBL-EBI]
GO:0048284        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061025        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090174        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0140056        [VIEW IN EMBL-EBI]
GO:1900150        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACGAGGAACCGAACGACGGTGTACAGGAAACACAGAGACGCGTGTAAGAGCGCGCGTGCTCCTCTGTCTGATTCGTTCGGTGGTCCGGTGATCGAAATGGTTAGCGGCTCTTTCGCTCGGTCCAATCACTCCTCTTATGCTCCTTTGAGCACCAATGATCCTGGTCCTTCAAGCAATGATGCCTTTACAATTGGTCTGCCACCAGCTTGGGTGGATGACTCCGAGGAGATCACATTTAATATACAGAAGGTGCGAGAGAAAATGGGCGAGCTAGCAAAGGCTCATTCAAAGGCTCTAATGCCTACCTTTGGAGATAACAAAGGGGATCAACGTGCTGTTGAGATGATCACTCATGAAATCACCGATCTGTTGAGGAAGTCAGAGAAGAGGTTGCACAATTTATCTACTAGAGGAGGAGGGCCTTCAGAAGAATCTAATCTCAGGAAAAATGTGCAGCGTTCTCTTGCAACAGATCTTCAGAGCCTCTCCATGGAGCTCCGCAGAAAACAGTCTACTTATTTGAAACGTCTCCAGCAGCAGAAAGAGGGTCAGGATGGAGTAGATTTGGAGTTTAACATGAATGGAAAGATGTCAAGAATGGATGAAGACGAAGAACTTGGTGGCATGGGTTTTGATGAACACCAGACAGTCACGTTGAAGGAAGGGCAACATGTCTCAGCGGAAAGGGAAAGAGAAATACAGCAGGTGTTGGGGTCAGTGAATGATCTTGCACAGATAATGAAAGACTTATCAGCTCTTGTGATTGATCAGGGCACAATAGTTGATCGGATAGACTACAATATCCAAAATGTTTCTACATCTGTCGGGGAAGGCTATAAGCAACTACAGAAGGCGGAGAGAACACAAAGAGAAGGAGCAATGGTGAAATGTGCGATGATACTCCTTATACTTTGCTTCATAATGATTGTCCTTTTAATTCTCAAGAATGTATTGTTTTAG
Protein:  
MATRNRTTVYRKHRDACKSARAPLSDSFGGPVIEMVSGSFARSNHSSYAPLSTNDPGPSSNDAFTIGLPPAWVDDSEEITFNIQKVREKMGELAKAHSKALMPTFGDNKGDQRAVEMITHEITDLLRKSEKRLHNLSTRGGGPSEESNLRKNVQRSLATDLQSLSMELRRKQSTYLKRLQQQKEGQDGVDLEFNMNGKMSRMDEDEELGGMGFDEHQTVTLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNIQNVSTSVGEGYKQLQKAERTQREGAMVKCAMILLILCFIMIVLLILKNVLF